BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B08LP1|AL424913
(1016 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1617 1955 0.0
>3x_Contig1617
Length = 15119
Score = 1955 bits (985), Expect = 0.0
Identities = 1010/1017 (99%), Gaps = 2/1017 (0%)
Strand = Plus / Plus
Query: 1 gcactatttgaaaaataggcctntcttcgagattatacaagaaattatcgaacccaagga 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1993 gcactatttgaaaaataggcct-tcttcgagattatacaagaaattatcgaacccaagga 2051
Query: 61 caagattcagatcgagtaaatatcatatatggtcaaaatacgatttaatacaagccttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2052 caagattcagatcgagtaaatatcatatatggtcaaaatacgatttaatacaagccttca 2111
Query: 121 tcgatttatgggcgtatatgtgatggcaacaaatttatttctaccggtgatggttccttt 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2112 tcgatttatgggcgtatatgtaatggcaacaaatttatttctaccggtgatggttccttt 2171
Query: 181 tcccccgcggctgatgacgatggtggggttacagacgaacttggttattcgaaaccatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2172 tcccccgcggctgatgacgatggtggggttacagacgaacttggttattcgaaaccatct 2231
Query: 241 actactttttctccactgcaaaaagaacttgtatccgattttgaagctgttaaattggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2232 actactttttctccactgcaaaaagaacttgtatccgattttgaagctgttaaattggct 2291
Query: 301 tttccccgttcctttggcctttatgacgcaagatgtaaataaaaatgtccgaaacttgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2292 tttccccgttcctttggcctttatgacgcaagatgtaaataaaaatgtccgaaacttgtc 2351
Query: 361 acttagcagttatcaccgaagttgcatattgagtggagcattagaatcctatttcggcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2352 acttagcagttatcaccgaagttgcatattgagtggagcattagaatcctatttcggcaa 2411
Query: 421 gaaaatatcacagaaaatgggggggaggacggattaaggcttttcaaacaaactatacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2412 gaaaatatcacagaaaatgggggggaggacggattaaggcttttcaaacaaactatacaa 2471
Query: 481 cgaagctatgtataaggacaatcaattgtcgctaactgacggtcagttgcccatttgagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2472 cgaagctatgtataaggacaatcaattgtcgctaactgacggtcagttgcccatttgagt 2531
Query: 541 gtcgtttcataagaraatacatgtgtggaatttgtatcacgtgactatgtctatgcgata 600
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2532 gtcgtttcataagaaaatacatgtgtggaatttgtatcacgtgactatgtctatgcgata 2591
Query: 601 ccttcctaaattgtgggtgttagccaaaacatttgcaagcattcgtaactaatttagaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2592 ccttcctaaattgtgggtgttagccaaaacatttgcaagcattcgtaactaatttagaat 2651
Query: 661 cttaaccgtgttcaaagagctttcaacattcaaattattgggacttttcatggaattaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2652 cttaaccgtgttcaaagagctttcaacattcaaattattgggacttttcatggaattaca 2711
Query: 721 catatttccttacattgttaatgtgctccccataaataagtttaaattcatacacgctgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2712 catatttccttacattgttaatgtgctccccataaataagtttaaattcatacacgctgt 2771
Query: 781 ggacttttctttttctgctgatgttaaaaagtgaaaagaatcttcggtgatgagatgaga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2772 ggacttttctttttctgctgatgttaaaaagtgaaaagaatcttcggtgatgagatgaga 2831
Query: 841 tgagatgagataatatagaatgattatacagataaatgacttatattctagcatcggaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2832 tgagatgagataatatagaatgattatacagataaatgacttatattctagcatcggaat 2891
Query: 901 atcctagttgaacgcataccgtacccaaacataaactgctcaaagaagatggtaacattt 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2892 atcctagttgaacgcataccgtacccaaacataaactgctcaaagaagatggtaacattt 2951
Query: 961 aattgtgaagtgtgtamgaatactgttcct-aaaagaacaccgaaaagcattactac 1016
|||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 2952 aattgtgaagtgtgtaacgatactgttcctaaaaagaacaccgaaaagcattactac 3008
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8960
Number of Sequences: 1807
Number of extensions: 8960
Number of successful extensions: 523
Number of sequences better than 1.0e-20: 1
length of query: 1016
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1000
effective length of database: 10,329,639
effective search space: 10329639000
effective search space used: 10329639000
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)